Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cotl1Q9CQI6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cotl1Q9CQI6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cotl1Q9CQI6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cotl1Q9CQI6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cotl1Q9CQI6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Gm12366-201ENSMUST00000121722 873 ntBASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Gm5786-201ENSMUST00000085368 882 ntBASIC15.27■□□□□ 0.04
Cotl1Q9CQI6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cotl1Q9CQI6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cotl1Q9CQI6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Gm10420-201ENSMUST00000121713 882 ntBASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cotl1Q9CQI6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cotl1Q9CQI6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 173.8 ms