Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim16Q99PP9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim16Q99PP9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim16Q99PP9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.05■□□□□ 0.64
Trim16Q99PP9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim16Q99PP9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.04■□□□□ 0.64
Trim16Q99PP9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.04■□□□□ 0.64
Trim16Q99PP9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim16Q99PP9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.03■□□□□ 0.64
Trim16Q99PP9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim16Q99PP9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.02■□□□□ 0.64
Trim16Q99PP9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim16Q99PP9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim16Q99PP9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim16Q99PP9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim16Q99PP9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.02■□□□□ 0.63
Trim16Q99PP9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim16Q99PP9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim16Q99PP9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.01■□□□□ 0.63
Trim16Q99PP9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.01■□□□□ 0.63
Trim16Q99PP9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim16Q99PP9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim16Q99PP9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms