Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim34aQ99PP6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim34aQ99PP6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim34aQ99PP6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim34aQ99PP6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim34aQ99PP6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim34aQ99PP6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.31■■□□□ 1.48
Trim34aQ99PP6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim34aQ99PP6 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.31■■□□□ 1.48
Trim34aQ99PP6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim34aQ99PP6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim34aQ99PP6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Mir5133-201ENSMUST00000174955 77 ntBASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trim34aQ99PP6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim34aQ99PP6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Trim34aQ99PP6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34aQ99PP6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.26■■□□□ 1.47
Trim34aQ99PP6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim34aQ99PP6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.26■■□□□ 1.47
Trim34aQ99PP6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.26■■□□□ 1.47
Trim34aQ99PP6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim34aQ99PP6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Gm13146-201ENSMUST00000118508 780 ntBASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Trim34aQ99PP6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms