Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4rQ99PI8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4rQ99PI8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rtn4rQ99PI8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4rQ99PI8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rtn4rQ99PI8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4rQ99PI8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn4rQ99PI8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rtn4rQ99PI8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.27■□□□□ 0.35
Rtn4rQ99PI8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn4rQ99PI8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms