Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd2Q99JR8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd2Q99JR8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarcd2Q99JR8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd2Q99JR8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.91■□□□□ 0.78
Smarcd2Q99JR8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd2Q99JR8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd2Q99JR8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Smarcd2Q99JR8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd2Q99JR8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcd2Q99JR8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms