Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc1bQ920F6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Smc1bQ920F6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc1bQ920F6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc1bQ920F6 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.53■■□□□ 1.2
Smc1bQ920F6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc1bQ920F6 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.52■■□□□ 1.19
Smc1bQ920F6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.52■■□□□ 1.19
Smc1bQ920F6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.51■■□□□ 1.19
Smc1bQ920F6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.51■■□□□ 1.19
Smc1bQ920F6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc1bQ920F6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc1bQ920F6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc1bQ920F6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc1bQ920F6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smc1bQ920F6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc1bQ920F6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc1bQ920F6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Smc1bQ920F6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Smc1bQ920F6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Smc1bQ920F6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc1bQ920F6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.46■■□□□ 1.19
Smc1bQ920F6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.46■■□□□ 1.19
Smc1bQ920F6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc1bQ920F6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Smc1bQ920F6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Gm11421-201ENSMUST00000122124 294 ntBASIC22.45■■□□□ 1.18
Smc1bQ920F6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Smc1bQ920F6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc1bQ920F6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.44■■□□□ 1.18
Smc1bQ920F6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smc1bQ920F6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smc1bQ920F6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Smc1bQ920F6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smc1bQ920F6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Smc1bQ920F6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms