Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Mir7075-201ENSMUST00000184187 82 ntBASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha3Q91Y16 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Pcdha3Q91Y16 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha3Q91Y16 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha3Q91Y16 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.52■□□□□ 0.87
Pcdha3Q91Y16 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha3Q91Y16 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha3Q91Y16 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha3Q91Y16 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdha3Q91Y16 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
Pcdha3Q91Y16 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Gm8493-201ENSMUST00000196881 489 ntBASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha3Q91Y16 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Spcs1-204ENSMUST00000226782 949 ntBASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Gm6139-201ENSMUST00000079261 882 ntBASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha3Q91Y16 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha3Q91Y16 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha3Q91Y16 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms