Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac1Q91Y10 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Gm9870-201ENSMUST00000063874 645 ntBASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac1Q91Y10 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac1Q91Y10 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac1Q91Y10 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac1Q91Y10 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac1Q91Y10 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac1Q91Y10 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhac1Q91Y10 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhac1Q91Y10 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhac1Q91Y10 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhac1Q91Y10 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Gm12922-201ENSMUST00000120626 809 ntBASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhac1Q91Y10 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms