Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb3Q91XZ7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb3Q91XZ7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb3Q91XZ7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb3Q91XZ7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Etf1-202ENSMUST00000180351 108 ntBASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb3Q91XZ7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb3Q91XZ7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb3Q91XZ7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb3Q91XZ7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb3Q91XZ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb3Q91XZ7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms