Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb2Q91XX7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb2Q91XX7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhgb2Q91XX7 Cap2-205ENSMUST00000225824 1634 ntBASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb2Q91XX7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.37■□□□□ 0.53
Pcdhgb2Q91XX7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb2Q91XX7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb2Q91XX7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgb2Q91XX7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb2Q91XX7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgb2Q91XX7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgb2Q91XX7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhgb2Q91XX7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms