Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.47■□□□□ 0.71
Vsx1Q91V10 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.47■□□□□ 0.71
Vsx1Q91V10 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx1Q91V10 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx1Q91V10 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.46■□□□□ 0.71
Vsx1Q91V10 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vsx1Q91V10 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.45■□□□□ 0.7
Vsx1Q91V10 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx1Q91V10 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx1Q91V10 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx1Q91V10 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx1Q91V10 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Gm8520-201ENSMUST00000186517 868 ntBASIC19.43■□□□□ 0.7
Vsx1Q91V10 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx1Q91V10 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx1Q91V10 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.41■□□□□ 0.7
Vsx1Q91V10 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.41■□□□□ 0.7
Vsx1Q91V10 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx1Q91V10 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx1Q91V10 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vsx1Q91V10 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vsx1Q91V10 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.39■□□□□ 0.69
Vsx1Q91V10 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.39■□□□□ 0.69
Vsx1Q91V10 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx1Q91V10 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx1Q91V10 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx1Q91V10 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.38■□□□□ 0.69
Vsx1Q91V10 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx1Q91V10 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vsx1Q91V10 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms