Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc71Q8VEG0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc71Q8VEG0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc71Q8VEG0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Ccdc71Q8VEG0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc71Q8VEG0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ccdc71Q8VEG0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ccdc71Q8VEG0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc71Q8VEG0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc71Q8VEG0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc71Q8VEG0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc71Q8VEG0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc71Q8VEG0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms