Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx39aQ8VDW0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.88■■□□□ 1.09
Ddx39aQ8VDW0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx39aQ8VDW0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx39aQ8VDW0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Gm27801-201ENSMUST00000184174 223 ntBASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.85■■□□□ 1.09
Ddx39aQ8VDW0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Gm37179-201ENSMUST00000194862 823 ntBASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx39aQ8VDW0 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Ddx39aQ8VDW0 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.83■■□□□ 1.08
Ddx39aQ8VDW0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx39aQ8VDW0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx39aQ8VDW0 Reep4-203ENSMUST00000226563 1444 ntBASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx39aQ8VDW0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx39aQ8VDW0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
Ddx39aQ8VDW0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx39aQ8VDW0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.78■■□□□ 1.08
Ddx39aQ8VDW0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.77■■□□□ 1.08
Ddx39aQ8VDW0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms