Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndc1Q8VCB1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndc1Q8VCB1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndc1Q8VCB1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ndc1Q8VCB1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndc1Q8VCB1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Ndc1Q8VCB1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndc1Q8VCB1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndc1Q8VCB1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ndc1Q8VCB1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms