Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf8Q8VC56 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf8Q8VC56 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf8Q8VC56 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf8Q8VC56 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf8Q8VC56 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.83■□□□□ 0.6
Rnf8Q8VC56 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf8Q8VC56 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf8Q8VC56 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf8Q8VC56 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf8Q8VC56 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf8Q8VC56 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf8Q8VC56 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf8Q8VC56 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Golgb1-201ENSMUST00000023534 498 ntBASIC18.77■□□□□ 0.6
Rnf8Q8VC56 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rnf8Q8VC56 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf8Q8VC56 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf8Q8VC56 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf8Q8VC56 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf8Q8VC56 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf8Q8VC56 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.75■□□□□ 0.59
Rnf8Q8VC56 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf8Q8VC56 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf8Q8VC56 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf8Q8VC56 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf8Q8VC56 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf8Q8VC56 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.74■□□□□ 0.59
Rnf8Q8VC56 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf8Q8VC56 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf8Q8VC56 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms