Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chmp7Q8R1T1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Gm12669-201ENSMUST00000122162 1009 ntBASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chmp7Q8R1T1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Gm42911-201ENSMUST00000199360 1630 ntBASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Chmp7Q8R1T1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 CT030146.1-201ENSMUST00000220919 217 ntBASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.22■■□□□ 1.63
Chmp7Q8R1T1 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.21■■□□□ 1.63
Chmp7Q8R1T1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC25.21■■□□□ 1.63
Chmp7Q8R1T1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Chmp7Q8R1T1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Chmp7Q8R1T1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.21■■□□□ 1.63
Chmp7Q8R1T1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Chmp7Q8R1T1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Chmp7Q8R1T1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Chmp7Q8R1T1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Chmp7Q8R1T1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
Chmp7Q8R1T1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
Chmp7Q8R1T1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Gm42555-201ENSMUST00000199304 1039 ntBASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Chmp7Q8R1T1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Mir5133-201ENSMUST00000174955 77 ntBASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Chmp7Q8R1T1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Chmp7Q8R1T1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Chmp7Q8R1T1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Chmp7Q8R1T1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Chmp7Q8R1T1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Chmp7Q8R1T1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Chmp7Q8R1T1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Chmp7Q8R1T1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms