Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col23a1Q8K4G2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col23a1Q8K4G2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC24.28■■□□□ 1.48
Col23a1Q8K4G2 Rab3c-203ENSMUST00000224180 967 ntBASIC24.28■■□□□ 1.48
Col23a1Q8K4G2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col23a1Q8K4G2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Col23a1Q8K4G2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Col23a1Q8K4G2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col23a1Q8K4G2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Col23a1Q8K4G2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col23a1Q8K4G2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Gm6576-201ENSMUST00000169678 883 ntBASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 AL672049.1-201ENSMUST00000197943 91 ntBASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Col23a1Q8K4G2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col23a1Q8K4G2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col23a1Q8K4G2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col23a1Q8K4G2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col23a1Q8K4G2 Gm5643-201ENSMUST00000117081 966 ntBASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col23a1Q8K4G2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Arhgef33-211ENSMUST00000225658 473 ntBASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col23a1Q8K4G2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col23a1Q8K4G2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.47
Col23a1Q8K4G2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col23a1Q8K4G2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Gm715-201ENSMUST00000117865 831 ntBASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Gm12896-201ENSMUST00000118430 226 ntBASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col23a1Q8K4G2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Gm37563-201ENSMUST00000192580 1513 ntBASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col23a1Q8K4G2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col23a1Q8K4G2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col23a1Q8K4G2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Col23a1Q8K4G2 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.14■■□□□ 1.46
Col23a1Q8K4G2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Col23a1Q8K4G2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms