Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vrk3Q8K3G5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.59■□□□□ 0.25
Vrk3Q8K3G5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk3Q8K3G5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vrk3Q8K3G5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk3Q8K3G5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk3Q8K3G5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vrk3Q8K3G5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk3Q8K3G5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vrk3Q8K3G5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk3Q8K3G5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk3Q8K3G5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vrk3Q8K3G5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk3Q8K3G5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Gm43530-201ENSMUST00000195920 274 ntBASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk3Q8K3G5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms