Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4rl1Q8K0S5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4rl1Q8K0S5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn4rl1Q8K0S5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Rtn4rl1Q8K0S5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn4rl1Q8K0S5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn4rl1Q8K0S5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rtn4rl1Q8K0S5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rl1Q8K0S5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rl1Q8K0S5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rl1Q8K0S5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm20760-201ENSMUST00000179197 648 ntBASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rl1Q8K0S5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm13534-201ENSMUST00000121169 513 ntBASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rl1Q8K0S5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Gm22240-201ENSMUST00000175225 82 ntBASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Rtn4rl1Q8K0S5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rtn4rl1Q8K0S5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms