Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Gm27801-201ENSMUST00000184174 223 ntBASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rdh1Q8CGV4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Gm42569-201ENSMUST00000200539 472 ntBASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rdh1Q8CGV4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Rdh1Q8CGV4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.12■□□□□ 0.65
Rdh1Q8CGV4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rdh1Q8CGV4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rdh1Q8CGV4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.09■□□□□ 0.65
Rdh1Q8CGV4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.08■□□□□ 0.65
Rdh1Q8CGV4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Rdh1Q8CGV4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.08■□□□□ 0.64
Rdh1Q8CGV4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rdh1Q8CGV4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Rdh1Q8CGV4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms