Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf222Q8CEF8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Gm10033-202ENSMUST00000211874 928 ntBASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf222Q8CEF8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.27■□□□□ 0.67
Rnf222Q8CEF8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf222Q8CEF8 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.26■□□□□ 0.67
Rnf222Q8CEF8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf222Q8CEF8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.26■□□□□ 0.67
Rnf222Q8CEF8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf222Q8CEF8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf222Q8CEF8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Gm7291-201ENSMUST00000199147 382 ntBASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf222Q8CEF8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Rnf222Q8CEF8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf222Q8CEF8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Rnf222Q8CEF8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rnf222Q8CEF8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf222Q8CEF8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 AV356131-201ENSMUST00000206201 750 ntBASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf222Q8CEF8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf222Q8CEF8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf222Q8CEF8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf222Q8CEF8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms