Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Rsph6aQ8CDR2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Rsph6aQ8CDR2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC25.79■■□□□ 1.72
Rsph6aQ8CDR2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC25.79■■□□□ 1.72
Rsph6aQ8CDR2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC25.79■■□□□ 1.72
Rsph6aQ8CDR2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rsph6aQ8CDR2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rsph6aQ8CDR2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC25.78■■□□□ 1.72
Rsph6aQ8CDR2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rsph6aQ8CDR2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.78■■□□□ 1.72
Rsph6aQ8CDR2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rsph6aQ8CDR2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 AA386476-201ENSMUST00000098781 1665 ntBASIC25.77■■□□□ 1.72
Rsph6aQ8CDR2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Rsph6aQ8CDR2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rsph6aQ8CDR2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rsph6aQ8CDR2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rsph6aQ8CDR2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rsph6aQ8CDR2 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 AC154266.1-201ENSMUST00000223190 503 ntBASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Rsph6aQ8CDR2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.73■■□□□ 1.71
Rsph6aQ8CDR2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rsph6aQ8CDR2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC25.73■■□□□ 1.71
Rsph6aQ8CDR2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Rsph6aQ8CDR2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.73■■□□□ 1.71
Rsph6aQ8CDR2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rsph6aQ8CDR2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rsph6aQ8CDR2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rsph6aQ8CDR2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rsph6aQ8CDR2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Rsph6aQ8CDR2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rsph6aQ8CDR2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
Rsph6aQ8CDR2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
Rsph6aQ8CDR2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rsph6aQ8CDR2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rsph6aQ8CDR2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rsph6aQ8CDR2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rsph6aQ8CDR2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rsph6aQ8CDR2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rsph6aQ8CDR2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC25.66■■□□□ 1.7
Rsph6aQ8CDR2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rsph6aQ8CDR2 Ap3s1-204ENSMUST00000225520 957 ntBASIC25.66■■□□□ 1.7
Rsph6aQ8CDR2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms