Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1g3Q8C4X2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1g3Q8C4X2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1g3Q8C4X2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Csnk1g3Q8C4X2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1g3Q8C4X2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.69■□□□□ 0.9
Csnk1g3Q8C4X2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.68■□□□□ 0.9
Csnk1g3Q8C4X2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
Csnk1g3Q8C4X2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1g3Q8C4X2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 Gm12441-201ENSMUST00000121806 588 ntBASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Csnk1g3Q8C4X2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Csnk1g3Q8C4X2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Csnk1g3Q8C4X2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Csnk1g3Q8C4X2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Csnk1g3Q8C4X2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Csnk1g3Q8C4X2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Csnk1g3Q8C4X2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Csnk1g3Q8C4X2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms