Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rft1Q8C3B8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rft1Q8C3B8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rft1Q8C3B8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rft1Q8C3B8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rft1Q8C3B8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rft1Q8C3B8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.39■□□□□ 0.38
Rft1Q8C3B8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rft1Q8C3B8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rft1Q8C3B8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rft1Q8C3B8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rft1Q8C3B8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rft1Q8C3B8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rft1Q8C3B8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rft1Q8C3B8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms