Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf2Q8BZT2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Gm37179-201ENSMUST00000194862 823 ntBASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf2Q8BZT2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf2Q8BZT2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf2Q8BZT2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.94■□□□□ 0.78
Sh3rf2Q8BZT2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf2Q8BZT2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf2Q8BZT2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3rf2Q8BZT2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Sh3rf2Q8BZT2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.89■□□□□ 0.77
Sh3rf2Q8BZT2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf2Q8BZT2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.89■□□□□ 0.77
Sh3rf2Q8BZT2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms