Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rd3Q8BRE0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rd3Q8BRE0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rd3Q8BRE0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rd3Q8BRE0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.83■□□□□ 0.93
Rd3Q8BRE0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rd3Q8BRE0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rd3Q8BRE0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rd3Q8BRE0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rd3Q8BRE0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Gm7514-201ENSMUST00000209475 934 ntBASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rd3Q8BRE0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rd3Q8BRE0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rd3Q8BRE0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms