Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sfr1Q8BP27 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Gm43173-201ENSMUST00000202246 593 ntBASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sfr1Q8BP27 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sfr1Q8BP27 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Sfr1Q8BP27 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sfr1Q8BP27 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sfr1Q8BP27 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Gm43017-201ENSMUST00000198296 752 ntBASIC19.83■□□□□ 0.77
Sfr1Q8BP27 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sfr1Q8BP27 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sfr1Q8BP27 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sfr1Q8BP27 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sfr1Q8BP27 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Gm15039-201ENSMUST00000118914 875 ntBASIC19.82■□□□□ 0.76
Sfr1Q8BP27 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sfr1Q8BP27 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms