Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcaf1Q8BNE1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tcaf1Q8BNE1 AA386476-201ENSMUST00000098781 1665 ntBASIC21.27■■□□□ 1
Tcaf1Q8BNE1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.27■□□□□ 0.99
Tcaf1Q8BNE1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tcaf1Q8BNE1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tcaf1Q8BNE1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcaf1Q8BNE1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tcaf1Q8BNE1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf1Q8BNE1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf1Q8BNE1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf1Q8BNE1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf1Q8BNE1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tcaf1Q8BNE1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.2■□□□□ 0.98
Tcaf1Q8BNE1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf1Q8BNE1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.2■□□□□ 0.98
Tcaf1Q8BNE1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.2■□□□□ 0.98
Tcaf1Q8BNE1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms