Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Chmp2bQ8BJF9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2bQ8BJF9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2bQ8BJF9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2bQ8BJF9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2bQ8BJF9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2bQ8BJF9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2bQ8BJF9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2bQ8BJF9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2bQ8BJF9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2bQ8BJF9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chmp2bQ8BJF9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2bQ8BJF9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Etf1-202ENSMUST00000180351 108 ntBASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2bQ8BJF9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chmp2bQ8BJF9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms