Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Rps24-207ENSMUST00000224568 714 ntBASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Gm9870-201ENSMUST00000063874 645 ntBASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf38Q8BI21 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Mir6236-201ENSMUST00000184437 123 ntBASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Gm45102-201ENSMUST00000207427 857 ntBASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf38Q8BI21 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Gm7417-201ENSMUST00000192950 473 ntBASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Gm43530-201ENSMUST00000195920 274 ntBASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf38Q8BI21 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf38Q8BI21 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf38Q8BI21 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf38Q8BI21 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Gm14117-201ENSMUST00000122417 843 ntBASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf38Q8BI21 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf38Q8BI21 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf38Q8BI21 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rnf38Q8BI21 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf38Q8BI21 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.85■□□□□ 0.61
Rnf38Q8BI21 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf38Q8BI21 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf38Q8BI21 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf38Q8BI21 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms