Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SpidrQ8BGX7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SpidrQ8BGX7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.28
SpidrQ8BGX7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SpidrQ8BGX7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Gm38205-201ENSMUST00000192243 258 ntBASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SpidrQ8BGX7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Gm12441-201ENSMUST00000121806 588 ntBASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SpidrQ8BGX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SpidrQ8BGX7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SpidrQ8BGX7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SpidrQ8BGX7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Gm4968-201ENSMUST00000071458 858 ntBASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SpidrQ8BGX7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SpidrQ8BGX7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SpidrQ8BGX7 AA386476-201ENSMUST00000098781 1665 ntBASIC23■■□□□ 1.27
SpidrQ8BGX7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23■■□□□ 1.27
SpidrQ8BGX7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23■■□□□ 1.27
SpidrQ8BGX7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23■■□□□ 1.27
SpidrQ8BGX7 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.99■■□□□ 1.27
SpidrQ8BGX7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SpidrQ8BGX7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.99■■□□□ 1.27
SpidrQ8BGX7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SpidrQ8BGX7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SpidrQ8BGX7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SpidrQ8BGX7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SpidrQ8BGX7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SpidrQ8BGX7 Gm13148-201ENSMUST00000118892 745 ntBASIC22.98■■□□□ 1.27
SpidrQ8BGX7 Gm10653-202ENSMUST00000139570 835 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms