Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim23Q8BGX0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim23Q8BGX0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim23Q8BGX0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim23Q8BGX0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim23Q8BGX0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Trim23Q8BGX0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim23Q8BGX0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.93■□□□□ 0.62
Trim23Q8BGX0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim23Q8BGX0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim23Q8BGX0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim23Q8BGX0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim23Q8BGX0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim23Q8BGX0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms