Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Npas4Q8BGD7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.81■□□□□ 0.92
Npas4Q8BGD7 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Gm4968-201ENSMUST00000071458 858 ntBASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npas4Q8BGD7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npas4Q8BGD7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npas4Q8BGD7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Npas4Q8BGD7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npas4Q8BGD7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npas4Q8BGD7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Npas4Q8BGD7 Gm10653-202ENSMUST00000139570 835 ntBASIC20.77■□□□□ 0.92
Npas4Q8BGD7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Npas4Q8BGD7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm7290-201ENSMUST00000104990 617 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm12918-201ENSMUST00000120234 636 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm15710-201ENSMUST00000121821 636 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Gm5075-201ENSMUST00000196916 622 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npas4Q8BGD7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npas4Q8BGD7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.75■□□□□ 0.91
Npas4Q8BGD7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npas4Q8BGD7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Npas4Q8BGD7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Npas4Q8BGD7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.74■□□□□ 0.91
Npas4Q8BGD7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npas4Q8BGD7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Npas4Q8BGD7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npas4Q8BGD7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms