Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrtm4Q80XG9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.14■□□□□ 0.66
Lrrtm4Q80XG9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.14■□□□□ 0.66
Lrrtm4Q80XG9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrtm4Q80XG9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrtm4Q80XG9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.12■□□□□ 0.65
Lrrtm4Q80XG9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrrtm4Q80XG9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.1■□□□□ 0.65
Lrrtm4Q80XG9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrrtm4Q80XG9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lrrtm4Q80XG9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Lrrtm4Q80XG9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Lrrtm4Q80XG9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lrrtm4Q80XG9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms