Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.74■□□□□ 0.59
Vrk1Q80X41 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.74■□□□□ 0.59
Vrk1Q80X41 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.74■□□□□ 0.59
Vrk1Q80X41 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vrk1Q80X41 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Gm27801-201ENSMUST00000184174 223 ntBASIC18.73■□□□□ 0.59
Vrk1Q80X41 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Vrk1Q80X41 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vrk1Q80X41 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Gm13234-201ENSMUST00000120010 747 ntBASIC18.72■□□□□ 0.59
Vrk1Q80X41 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.72■□□□□ 0.59
Vrk1Q80X41 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.72■□□□□ 0.59
Vrk1Q80X41 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Reep4-203ENSMUST00000226563 1444 ntBASIC18.72■□□□□ 0.59
Vrk1Q80X41 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vrk1Q80X41 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vrk1Q80X41 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.71■□□□□ 0.58
Vrk1Q80X41 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.7■□□□□ 0.58
Vrk1Q80X41 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vrk1Q80X41 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Gm10602-201ENSMUST00000098239 609 ntBASIC18.7■□□□□ 0.58
Vrk1Q80X41 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vrk1Q80X41 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vrk1Q80X41 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vrk1Q80X41 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.67■□□□□ 0.58
Vrk1Q80X41 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vrk1Q80X41 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Gm12933-201ENSMUST00000120203 872 ntBASIC18.66■□□□□ 0.58
Vrk1Q80X41 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.66■□□□□ 0.58
Vrk1Q80X41 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vrk1Q80X41 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms