Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Prpf40bQ80W14 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Prpf40bQ80W14 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Prpf40bQ80W14 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Prpf40bQ80W14 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf40bQ80W14 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Prpf40bQ80W14 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Gm10653-202ENSMUST00000139570 835 ntBASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf40bQ80W14 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Prpf40bQ80W14 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Gm11421-201ENSMUST00000122124 294 ntBASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf40bQ80W14 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Gm9988-201ENSMUST00000069786 435 ntBASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf40bQ80W14 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Prpf40bQ80W14 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf40bQ80W14 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
Prpf40bQ80W14 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Prpf40bQ80W14 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms