Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.69■□□□□ 0.74
Rpp38Q80UU2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp38Q80UU2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp38Q80UU2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rpp38Q80UU2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp38Q80UU2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.65■□□□□ 0.74
Rpp38Q80UU2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Rpp38Q80UU2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.64■□□□□ 0.74
Rpp38Q80UU2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpp38Q80UU2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Gm43173-201ENSMUST00000202246 593 ntBASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp38Q80UU2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Gm8493-201ENSMUST00000196881 489 ntBASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Gm6139-201ENSMUST00000079261 882 ntBASIC19.63■□□□□ 0.73
Rpp38Q80UU2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Gm45417-201ENSMUST00000209533 758 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms