Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm38205-201ENSMUST00000192243 258 ntBASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr5Q80TP3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr5Q80TP3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr5Q80TP3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.33■□□□□ 0.36
Ubr5Q80TP3 Dio3-201ENSMUST00000097228 1449 ntBASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr5Q80TP3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ubr5Q80TP3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr5Q80TP3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.29■□□□□ 0.36
Ubr5Q80TP3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr5Q80TP3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr5Q80TP3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr5Q80TP3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr5Q80TP3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr5Q80TP3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr5Q80TP3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr5Q80TP3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms