Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh19Q80TF3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh19Q80TF3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh19Q80TF3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh19Q80TF3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh19Q80TF3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh19Q80TF3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh19Q80TF3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh19Q80TF3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh19Q80TF3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh19Q80TF3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms