Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.52■■□□□ 1.04
Ush1gQ80T11 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ush1gQ80T11 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ush1gQ80T11 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ush1gQ80T11 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ush1gQ80T11 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.48■■□□□ 1.03
Ush1gQ80T11 Gm12933-201ENSMUST00000120203 872 ntBASIC21.48■■□□□ 1.03
Ush1gQ80T11 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ush1gQ80T11 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ush1gQ80T11 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ush1gQ80T11 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ush1gQ80T11 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ush1gQ80T11 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.47■■□□□ 1.03
Ush1gQ80T11 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.47■■□□□ 1.03
Ush1gQ80T11 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.46■■□□□ 1.03
Ush1gQ80T11 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Gm9988-201ENSMUST00000069786 435 ntBASIC21.46■■□□□ 1.03
Ush1gQ80T11 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ush1gQ80T11 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ush1gQ80T11 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ush1gQ80T11 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.44■■□□□ 1.02
Ush1gQ80T11 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 174.2 ms