Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
ShprhQ7TPQ3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ShprhQ7TPQ3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ShprhQ7TPQ3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 AC122769.4-201ENSMUST00000228166 901 ntBASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ShprhQ7TPQ3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC28.36■■■□□ 2.13
ShprhQ7TPQ3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ShprhQ7TPQ3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
ShprhQ7TPQ3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ShprhQ7TPQ3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ShprhQ7TPQ3 Gm7290-201ENSMUST00000104990 617 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Gm12918-201ENSMUST00000120234 636 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Gm15710-201ENSMUST00000121821 636 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Gm5075-201ENSMUST00000196916 622 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ShprhQ7TPQ3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ShprhQ7TPQ3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
ShprhQ7TPQ3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ShprhQ7TPQ3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ShprhQ7TPQ3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
ShprhQ7TPQ3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ShprhQ7TPQ3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShprhQ7TPQ3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShprhQ7TPQ3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShprhQ7TPQ3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShprhQ7TPQ3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ShprhQ7TPQ3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Gm20760-201ENSMUST00000179197 648 ntBASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Gm43909-201ENSMUST00000203443 1876 ntBASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
ShprhQ7TPQ3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ShprhQ7TPQ3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ShprhQ7TPQ3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Gm5408-201ENSMUST00000197998 747 ntBASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
ShprhQ7TPQ3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ShprhQ7TPQ3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC28.28■■■□□ 2.12
ShprhQ7TPQ3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
ShprhQ7TPQ3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ShprhQ7TPQ3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC28.27■■■□□ 2.12
ShprhQ7TPQ3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ShprhQ7TPQ3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC28.27■■■□□ 2.12
ShprhQ7TPQ3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
ShprhQ7TPQ3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.12
ShprhQ7TPQ3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
ShprhQ7TPQ3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ShprhQ7TPQ3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ShprhQ7TPQ3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ShprhQ7TPQ3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ShprhQ7TPQ3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Gm20049-201ENSMUST00000219950 730 ntBASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ShprhQ7TPQ3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms