Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rif1Q6PR54 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rif1Q6PR54 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Gm13146-201ENSMUST00000118508 780 ntBASIC16.66■□□□□ 0.26
Rif1Q6PR54 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.66■□□□□ 0.26
Rif1Q6PR54 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rif1Q6PR54 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rif1Q6PR54 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rif1Q6PR54 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rif1Q6PR54 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rif1Q6PR54 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.64■□□□□ 0.25
Rif1Q6PR54 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.64■□□□□ 0.25
Rif1Q6PR54 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rif1Q6PR54 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.63■□□□□ 0.25
Rif1Q6PR54 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.63■□□□□ 0.25
Rif1Q6PR54 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rif1Q6PR54 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rif1Q6PR54 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.62■□□□□ 0.25
Rif1Q6PR54 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rif1Q6PR54 Gm15378-201ENSMUST00000121894 207 ntBASIC16.61■□□□□ 0.25
Rif1Q6PR54 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rif1Q6PR54 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Gm12896-201ENSMUST00000118430 226 ntBASIC16.6■□□□□ 0.25
Rif1Q6PR54 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rif1Q6PR54 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rif1Q6PR54 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rif1Q6PR54 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.59■□□□□ 0.25
Rif1Q6PR54 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rif1Q6PR54 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rif1Q6PR54 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms