Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rad54bQ6PFE3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.78■□□□□ 0.76
Rad54bQ6PFE3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rad54bQ6PFE3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rad54bQ6PFE3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rad54bQ6PFE3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rad54bQ6PFE3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rad54bQ6PFE3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rad54bQ6PFE3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rad54bQ6PFE3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.74■□□□□ 0.75
Rad54bQ6PFE3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rad54bQ6PFE3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rad54bQ6PFE3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Gm15546-201ENSMUST00000122095 826 ntBASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rad54bQ6PFE3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rad54bQ6PFE3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rad54bQ6PFE3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rad54bQ6PFE3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms