Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Gm12441-201ENSMUST00000121806 588 ntBASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chd4Q6PDQ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chd4Q6PDQ2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Gm38205-201ENSMUST00000192243 258 ntBASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chd4Q6PDQ2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC26.08■■□□□ 1.77
Chd4Q6PDQ2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Chd4Q6PDQ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC26.08■■□□□ 1.76
Chd4Q6PDQ2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Chd4Q6PDQ2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.07■■□□□ 1.76
Chd4Q6PDQ2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Chd4Q6PDQ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Chd4Q6PDQ2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC26.07■■□□□ 1.76
Chd4Q6PDQ2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Gm4968-201ENSMUST00000071458 858 ntBASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Gm43909-201ENSMUST00000203443 1876 ntBASIC26.06■■□□□ 1.76
Chd4Q6PDQ2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chd4Q6PDQ2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Chd4Q6PDQ2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Chd4Q6PDQ2 Mir5133-201ENSMUST00000174955 77 ntBASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 Gm10602-201ENSMUST00000098239 609 ntBASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chd4Q6PDQ2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Chd4Q6PDQ2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chd4Q6PDQ2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chd4Q6PDQ2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chd4Q6PDQ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC26.02■■□□□ 1.76
Chd4Q6PDQ2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chd4Q6PDQ2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chd4Q6PDQ2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC26■■□□□ 1.75
Chd4Q6PDQ2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Gm6211-202ENSMUST00000167849 925 ntBASIC26■■□□□ 1.75
Chd4Q6PDQ2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Chd4Q6PDQ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.99■■□□□ 1.75
Chd4Q6PDQ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Chd4Q6PDQ2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Chd4Q6PDQ2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Chd4Q6PDQ2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Gm6420-201ENSMUST00000193885 723 ntBASIC25.98■■□□□ 1.75
Chd4Q6PDQ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC25.98■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms