Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc3Q64519 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.81■□□□□ 0.6
Sdc3Q64519 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sdc3Q64519 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Sdc3Q64519 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sdc3Q64519 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.81■□□□□ 0.6
Sdc3Q64519 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sdc3Q64519 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc3Q64519 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc3Q64519 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdc3Q64519 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Sdc3Q64519 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc3Q64519 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc3Q64519 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc3Q64519 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc3Q64519 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sdc3Q64519 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.79■□□□□ 0.6
Sdc3Q64519 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.79■□□□□ 0.6
Sdc3Q64519 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sdc3Q64519 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sdc3Q64519 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc3Q64519 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Sdc3Q64519 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.78■□□□□ 0.6
Sdc3Q64519 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc3Q64519 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.78■□□□□ 0.6
Sdc3Q64519 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc3Q64519 Golph3-202ENSMUST00000226517 2359 ntBASIC18.77■□□□□ 0.6
Sdc3Q64519 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc3Q64519 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sdc3Q64519 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc3Q64519 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc3Q64519 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.77■□□□□ 0.6
Sdc3Q64519 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdc3Q64519 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sdc3Q64519 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdc3Q64519 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sdc3Q64519 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sdc3Q64519 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc3Q64519 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sdc3Q64519 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc3Q64519 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc3Q64519 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdc3Q64519 Smad6-203ENSMUST00000179458 273 ntBASIC18.74■□□□□ 0.59
Sdc3Q64519 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc3Q64519 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sdc3Q64519 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc3Q64519 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdc3Q64519 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.73■□□□□ 0.59
Sdc3Q64519 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sdc3Q64519 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc3Q64519 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc3Q64519 Gm43060-201ENSMUST00000200621 289 ntBASIC18.73■□□□□ 0.59
Sdc3Q64519 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc3Q64519 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.73■□□□□ 0.59
Sdc3Q64519 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc3Q64519 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms