Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.01■□□□□ 0.95
Six2Q62232 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Six2Q62232 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21■□□□□ 0.95
Six2Q62232 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Six2Q62232 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six2Q62232 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.99■□□□□ 0.95
Six2Q62232 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.99■□□□□ 0.95
Six2Q62232 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six2Q62232 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six2Q62232 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Six2Q62232 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six2Q62232 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six2Q62232 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six2Q62232 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six2Q62232 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six2Q62232 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six2Q62232 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Six2Q62232 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Six2Q62232 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six2Q62232 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Six2Q62232 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Six2Q62232 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six2Q62232 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six2Q62232 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.95■□□□□ 0.94
Six2Q62232 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.95■□□□□ 0.94
Six2Q62232 Serp2-204ENSMUST00000228055 705 ntBASIC20.95■□□□□ 0.94
Six2Q62232 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Six2Q62232 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six2Q62232 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Six2Q62232 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six2Q62232 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six2Q62232 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six2Q62232 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Six2Q62232 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Six2Q62232 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six2Q62232 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six2Q62232 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.94■□□□□ 0.94
Six2Q62232 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
Six2Q62232 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six2Q62232 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six2Q62232 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Six2Q62232 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Six2Q62232 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Six2Q62232 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Gm12251-201ENSMUST00000117893 792 ntBASIC20.93■□□□□ 0.94
Six2Q62232 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Six2Q62232 Gm43137-201ENSMUST00000198052 594 ntBASIC20.93■□□□□ 0.94
Six2Q62232 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Six2Q62232 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six2Q62232 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Six2Q62232 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Six2Q62232 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six2Q62232 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six2Q62232 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Six2Q62232 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six2Q62232 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six2Q62232 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Six2Q62232 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Six2Q62232 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six2Q62232 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six2Q62232 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six2Q62232 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Six2Q62232 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.9■□□□□ 0.94
Six2Q62232 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.9■□□□□ 0.94
Six2Q62232 Gm13241-201ENSMUST00000094493 780 ntBASIC20.9■□□□□ 0.94
Six2Q62232 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Six2Q62232 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six2Q62232 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms