Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Gm6420-201ENSMUST00000193885 723 ntBASIC21.72■■□□□ 1.07
Ddx4Q61496 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx4Q61496 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx4Q61496 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ddx4Q61496 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.71■■□□□ 1.07
Ddx4Q61496 Gm20049-201ENSMUST00000219950 730 ntBASIC21.71■■□□□ 1.07
Ddx4Q61496 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx4Q61496 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Ddx4Q61496 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx4Q61496 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx4Q61496 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ddx4Q61496 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ddx4Q61496 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.7■■□□□ 1.06
Ddx4Q61496 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx4Q61496 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.7■■□□□ 1.06
Ddx4Q61496 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.7■■□□□ 1.06
Ddx4Q61496 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ddx4Q61496 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx4Q61496 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.68■■□□□ 1.06
Ddx4Q61496 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.68■■□□□ 1.06
Ddx4Q61496 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx4Q61496 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.68■■□□□ 1.06
Ddx4Q61496 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ddx4Q61496 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx4Q61496 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.67■■□□□ 1.06
Ddx4Q61496 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx4Q61496 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.67■■□□□ 1.06
Ddx4Q61496 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx4Q61496 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.67■■□□□ 1.06
Ddx4Q61496 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx4Q61496 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx4Q61496 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ddx4Q61496 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ddx4Q61496 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Ddx4Q61496 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx4Q61496 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.66■■□□□ 1.06
Ddx4Q61496 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.66■■□□□ 1.06
Ddx4Q61496 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx4Q61496 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ddx4Q61496 Gm10812-201ENSMUST00000099864 546 ntBASIC21.66■■□□□ 1.06
Ddx4Q61496 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx4Q61496 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx4Q61496 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.65■■□□□ 1.06
Ddx4Q61496 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 Gm13534-201ENSMUST00000121169 513 ntBASIC21.65■■□□□ 1.06
Ddx4Q61496 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ddx4Q61496 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx4Q61496 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Ddx4Q61496 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.65■■□□□ 1.06
Ddx4Q61496 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx4Q61496 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx4Q61496 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx4Q61496 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Ddx4Q61496 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx4Q61496 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx4Q61496 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx4Q61496 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ddx4Q61496 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms