Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.41■□□□□ 0.54
Sox17Q61473 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sox17Q61473 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox17Q61473 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sox17Q61473 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Sox17Q61473 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sox17Q61473 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox17Q61473 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox17Q61473 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox17Q61473 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sox17Q61473 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox17Q61473 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox17Q61473 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.39■□□□□ 0.54
Sox17Q61473 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox17Q61473 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sox17Q61473 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.39■□□□□ 0.53
Sox17Q61473 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Sox17Q61473 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox17Q61473 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sox17Q61473 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sox17Q61473 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox17Q61473 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Sox17Q61473 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.38■□□□□ 0.53
Sox17Q61473 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.38■□□□□ 0.53
Sox17Q61473 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox17Q61473 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox17Q61473 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sox17Q61473 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox17Q61473 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sox17Q61473 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.37■□□□□ 0.53
Sox17Q61473 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox17Q61473 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox17Q61473 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox17Q61473 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox17Q61473 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sox17Q61473 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox17Q61473 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Sox17Q61473 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox17Q61473 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sox17Q61473 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sox17Q61473 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sox17Q61473 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox17Q61473 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sox17Q61473 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.34■□□□□ 0.53
Sox17Q61473 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.34■□□□□ 0.53
Sox17Q61473 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox17Q61473 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sox17Q61473 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Sox17Q61473 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Sox17Q61473 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox17Q61473 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox17Q61473 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox17Q61473 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.33■□□□□ 0.52
Sox17Q61473 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sox17Q61473 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox17Q61473 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox17Q61473 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms