Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a1Q61245 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Col11a1Q61245 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a1Q61245 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a1Q61245 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.47■■□□□ 1.19
Col11a1Q61245 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.46■■□□□ 1.19
Col11a1Q61245 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Col11a1Q61245 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col11a1Q61245 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Col11a1Q61245 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Col11a1Q61245 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Col11a1Q61245 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col11a1Q61245 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col11a1Q61245 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col11a1Q61245 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col11a1Q61245 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col11a1Q61245 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.43■■□□□ 1.18
Col11a1Q61245 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Gm7977-201ENSMUST00000193787 748 ntBASIC22.43■■□□□ 1.18
Col11a1Q61245 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Col11a1Q61245 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.43■■□□□ 1.18
Col11a1Q61245 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.43■■□□□ 1.18
Col11a1Q61245 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col11a1Q61245 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Col11a1Q61245 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.42■■□□□ 1.18
Col11a1Q61245 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Col11a1Q61245 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Col11a1Q61245 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col11a1Q61245 Gm27275-201ENSMUST00000184318 272 ntBASIC22.41■■□□□ 1.18
Col11a1Q61245 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col11a1Q61245 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col11a1Q61245 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col11a1Q61245 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col11a1Q61245 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col11a1Q61245 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col11a1Q61245 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col11a1Q61245 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col11a1Q61245 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Col11a1Q61245 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col11a1Q61245 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col11a1Q61245 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col11a1Q61245 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Col11a1Q61245 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col11a1Q61245 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col11a1Q61245 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col11a1Q61245 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Col11a1Q61245 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Col11a1Q61245 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Col11a1Q61245 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.39■■□□□ 1.17
Col11a1Q61245 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.38■■□□□ 1.17
Col11a1Q61245 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.38■■□□□ 1.17
Col11a1Q61245 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col11a1Q61245 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col11a1Q61245 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col11a1Q61245 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col11a1Q61245 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.38■■□□□ 1.17
Col11a1Q61245 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Col11a1Q61245 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col11a1Q61245 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a1Q61245 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.37■■□□□ 1.17
Col11a1Q61245 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a1Q61245 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a1Q61245 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.37■■□□□ 1.17
Col11a1Q61245 Rab3c-203ENSMUST00000224180 967 ntBASIC22.37■■□□□ 1.17
Col11a1Q61245 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.37■■□□□ 1.17
Col11a1Q61245 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a1Q61245 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a1Q61245 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Col11a1Q61245 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Col11a1Q61245 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a1Q61245 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms