Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Ptch1Q61115 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC28.91■■■□□ 2.22
Ptch1Q61115 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.91■■■□□ 2.22
Ptch1Q61115 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
Ptch1Q61115 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptch1Q61115 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ptch1Q61115 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Ptch1Q61115 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.9■■■□□ 2.22
Ptch1Q61115 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Ptch1Q61115 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ptch1Q61115 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Ptch1Q61115 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ptch1Q61115 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Ptch1Q61115 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ptch1Q61115 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC28.89■■■□□ 2.22
Ptch1Q61115 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ptch1Q61115 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC28.89■■■□□ 2.22
Ptch1Q61115 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Ptch1Q61115 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.21
Ptch1Q61115 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Ptch1Q61115 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC28.88■■■□□ 2.21
Ptch1Q61115 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Ptch1Q61115 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ptch1Q61115 AC122428.2-201ENSMUST00000216321 1832 ntBASIC28.88■■■□□ 2.21
Ptch1Q61115 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ptch1Q61115 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ptch1Q61115 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ptch1Q61115 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC28.87■■■□□ 2.21
Ptch1Q61115 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ptch1Q61115 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Ptch1Q61115 Rab3c-203ENSMUST00000224180 967 ntBASIC28.86■■■□□ 2.21
Ptch1Q61115 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
Ptch1Q61115 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Ptch1Q61115 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ptch1Q61115 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptch1Q61115 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptch1Q61115 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Ptch1Q61115 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Ptch1Q61115 Gm42911-201ENSMUST00000199360 1630 ntBASIC28.85■■■□□ 2.21
Ptch1Q61115 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ptch1Q61115 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.84■■■□□ 2.21
Ptch1Q61115 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC28.84■■■□□ 2.21
Ptch1Q61115 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
Ptch1Q61115 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Ptch1Q61115 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptch1Q61115 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptch1Q61115 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
Ptch1Q61115 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Ptch1Q61115 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptch1Q61115 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ptch1Q61115 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
Ptch1Q61115 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ptch1Q61115 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC28.82■■■□□ 2.2
Ptch1Q61115 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC28.82■■■□□ 2.2
Ptch1Q61115 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ptch1Q61115 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC28.81■■■□□ 2.2
Ptch1Q61115 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Ptch1Q61115 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ptch1Q61115 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Ptch1Q61115 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Ptch1Q61115 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Ptch1Q61115 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptch1Q61115 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptch1Q61115 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ptch1Q61115 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ptch1Q61115 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Ptch1Q61115 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ptch1Q61115 Gm37563-201ENSMUST00000192580 1513 ntBASIC28.79■■■□□ 2.2
Ptch1Q61115 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptch1Q61115 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
Ptch1Q61115 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptch1Q61115 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptch1Q61115 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptch1Q61115 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ptch1Q61115 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptch1Q61115 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptch1Q61115 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ptch1Q61115 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Ptch1Q61115 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptch1Q61115 Krtap5-1-202ENSMUST00000188274 742 ntBASIC28.77■■■□□ 2.2
Ptch1Q61115 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptch1Q61115 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Ptch1Q61115 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ptch1Q61115 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ptch1Q61115 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Ptch1Q61115 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Ptch1Q61115 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ptch1Q61115 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ptch1Q61115 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ptch1Q61115 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.75■■■□□ 2.19
Ptch1Q61115 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ptch1Q61115 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC28.75■■■□□ 2.19
Ptch1Q61115 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC28.75■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms